| Benzene | Paraburkholderia xenovorans LB400 | | + |
Haddock JD, Gibson DT. Purification and characterization of the oxygenase component of biphenyl 2,3-dioxygenase from Pseudomonas sp. strain LB400. J Bacteriol. 1995 Oct;177(20):5834-9. Erratum in: J Bacteriol 1996 Apr;178(7):258. PubMed Central PMCID: PMC177406.
PMID: 7592331
|
| Benzene | Escherichia coli BL21 pSHF400 | | + |
Suenaga H, Mitsuoka M, Ura Y, Watanabe T, Furukawa K. Directed evolution of biphenyl dioxygenase: emergence of enhanced degradation capacity for benzene, toluene, and alkylbenzenes. J Bacteriol. 2001 Sep;183(18):5441-4. PubMed PMID:
PMID: 11514531
|
| benzophenone | Escherichia coli DH11S pDB31[LB400-bphFG] + pQE31[bphAE] | | + |
Pham, T. T. M., & Sylvestre, M. (2013). Has the Bacterial Biphenyl Catabolic Pathway Evolved Primarily To Degrade Biphenyl? The Diphenylmethane Case. Journal of Bacteriology, 195(16), 3563–3574.
doi: 10.1128/JB.00161-13 |
| carbazole | Paraburkholderia xenovorans LB400 | | + |
Haddock JD, Gibson DT. Purification and characterization of the oxygenase component of biphenyl 2,3-dioxygenase from Pseudomonas sp. strain LB400. J Bacteriol. 1995 Oct;177(20):5834-9. Erratum in: J Bacteriol 1996 Apr;178(7):258. PubMed Central PMCID: PMC177406.
PMID: 7592331
|
| cis-Stilbene | Escherichia coli BL21 pAIA111 bphA1A2A3A4 | | + |
Gibson DT. Beijerinckia sp strain B a strain by any other name. J Ind Microbiol Biotechnol. 1999 Oct;23(4-5):284-293.
PMID: 11423945
|
| cis-Stilbene | Escherichia coli BL21 pAIA743 | | + |
Overwin, H., González, M., Standfuß-Gabisch, C., Hofer, B., Wray, V., Reichelt, J., … Méndez, V. (2015). Permissivity of the biphenyl-specific aerobic bacterial metabolic pathway towards analogues with various steric requirements. Microbiology, 161(9), 1844–1856.
doi: 10.1099/mic.0.000138 |
| dibenzothiophene | Paraburkholderia xenovorans LB400 | | + |
Haddock JD, Gibson DT. Purification and characterization of the oxygenase component of biphenyl 2,3-dioxygenase from Pseudomonas sp. strain LB400. J Bacteriol. 1995 Oct;177(20):5834-9. Erratum in: J Bacteriol 1996 Apr;178(7):258. PubMed Central PMCID: PMC177406.
PMID: 7592331
|
| ethylbenzene | Escherichia coli BL21 pSHF400 | | + |
Suenaga H, Mitsuoka M, Ura Y, Watanabe T, Furukawa K. Directed evolution of biphenyl dioxygenase: emergence of enhanced degradation capacity for benzene, toluene, and alkylbenzenes. J Bacteriol. 2001 Sep;183(18):5441-4. PubMed PMID:
PMID: 11514531
|
| flavone | Escherichia coli DH11S pDB31[LB400-bphFG] + pQE31[bphAE] | | + |
Pham, T. T. M., Tu, Y., & Sylvestre, M. (2012). Remarkable Ability of Pandoraea pnomenusa B356 Biphenyl Dioxygenase To Metabolize Simple Flavonoids. Applied and Environmental Microbiology, 78(10), 3560–3570.
doi: 10.1128/AEM.00225-12 |
| isoflavone | Escherichia coli DH11S pDB31[LB400-bphFG] + pQE31[bphAE] | | + |
Pham, T. T. M., Tu, Y., & Sylvestre, M. (2012). Remarkable Ability of Pandoraea pnomenusa B356 Biphenyl Dioxygenase To Metabolize Simple Flavonoids. Applied and Environmental Microbiology, 78(10), 3560–3570.
doi: 10.1128/AEM.00225-12 |
| naphthalene | Paraburkholderia xenovorans LB400 | | + |
Haddock JD, Gibson DT. Purification and characterization of the oxygenase component of biphenyl 2,3-dioxygenase from Pseudomonas sp. strain LB400. J Bacteriol. 1995 Oct;177(20):5834-9. Erratum in: J Bacteriol 1996 Apr;178(7):258. PubMed Central PMCID: PMC177406.
PMID: 7592331
|
| Toluene | Paraburkholderia xenovorans LB400 | | + |
Gibson DT, Cruden DL, Haddock JD, Zylstra GJ, Brand JM. Oxidation of polychlorinated biphenyls by Pseudomonas sp. strain LB400 and Pseudomonas pseudoalcaligenes KF707. J Bacteriol. 1993 Jul;175(14):4561-4. Erratum in: J Bacteriol 1993 Oct;175(20):6735. PubMed Central PMCID:
PMID: 8331086
|
| Toluene | Paraburkholderia xenovorans LB400 | | + |
Haddock JD, Gibson DT. Purification and characterization of the oxygenase component of biphenyl 2,3-dioxygenase from Pseudomonas sp. strain LB400. J Bacteriol. 1995 Oct;177(20):5834-9. Erratum in: J Bacteriol 1996 Apr;178(7):258. PubMed Central PMCID: PMC177406.
PMID: 7592331
|
| Toluene | Escherichia coli BL21 pSHF400 | | + |
Suenaga H, Mitsuoka M, Ura Y, Watanabe T, Furukawa K. Directed evolution of biphenyl dioxygenase: emergence of enhanced degradation capacity for benzene, toluene, and alkylbenzenes. J Bacteriol. 2001 Sep;183(18):5441-4. PubMed PMID:
PMID: 11514531
|
